The average suiteness scores for the lowest RMSD decoys.

The table shows the average scores for the lowest RMSD decoys generated by BARNACLE, the mixture model and the uniform model. The average scores are calculated by Suitename [31] and higher scores indicate higher quality. Len: the number of nucleotides in the molecule; Bps: the number of Watson Crick and G–U wobble base pairs in the structure; Best struct: the average suiteness per suite for the lowest RMSD structure; Best C4′ struct: the average suiteness per suite for the lowest C4′ RMSD structure; Target: the average suiteness per suite for the experimental determined target structures. The highest (best) suiteness scores are highlighted with bold face. A dash indicates that no structures with the correct base paring (energy below 1.0 Å) were obtained.