Additional file 2 of Genome-resolved evidence for functionally redundant communities and novel nitrogen fixers in the deyin-1 hydrothermal field, Mid-Atlantic Ridge
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Additional file 1:. Table S1 Information regarding the samples, metagenomes, and assemblies in the current study. Table S2 219 high-quality MAGs (a) and 615 MAGs (b) obtained in the current study. Table S3 Information regarding the functional gene abundance in the samples TVG10 (a), TVG11 (b), TVG12 (c), and TVG13 (d). The abundance of each gene harbored by each taxon is normalized by RPKM (mapped reads per kilobase scaffolds per million sequenced reads) method. Table S4 Information regarding the abundances of CAZymes and secreted CAZymes in the samples TVG10 (a), TVG11 (b), TVG12 (c), and TVG13 (d). The abundance of each gene harbored by each taxon is normalized by RPKM (mapped reads per kilobase scaffolds per million sequenced reads) method. Table S5 Taxonomic details of this study and reference active and inactive samples that were used in the Figure 2 and S7b. Table S6 The accession ID and taxonomic information of the NifH sequences used in Figure 5a. Supplementary Data 1 Phylogenetic tree of bacterial MAGs based on 120 bacterial marker genes in newick format. The values depicted on the branches are bootstrap values. Supplementary Data 2 Phylogenetic tree of archaeal MAGs based on 122 archaeal marker genes in newick format. The values depicted on the branches are bootstrap values. Supplementary Data 3 Phylogenetic tree of 16S rRNA genes in newick format. The values depicted on the branches are bootstrap values. Supplementary Data 4 Phylogenetic tree of MAGs based on 16 ribosomal protein sequences in newick format. The values depicted on the branches are bootstrap values.
创建时间:
2022-01-19



