Chromosome by chromosome linkage disequilibrium (LD) analysis within three representative sub-populations of cultivated tomato.

1The estimate of the 95th percentile baseline r2 value in each germplasm group was 0.23 in the processing varieties, 0.12 in the fresh market varieties, and 0.11 in the vintage varieties.
2Logally weighted scatterplot smoothing [66].
3Non-linear regression [67]. For NLR, the expected r2 was calculated using the model of Hill and Weir (1988).
n.d.  =  not determined.