Additional file 2 of Gene expression variability across cells and species shapes the relationship between renal resident macrophages and infiltrated macrophages

Additional file 2. Supplementary Tables. Table S1. DEGs between resident and infiltrated macrophages in human. Table S2. DEGs between resident and infiltrated macrophages in mouse. Table S3. DEGs between resident and infiltrated macrophages in rat. Table S4. Enriched pathways of DEGs upregulated in resident macrophages. Table S5. Enriched pathways of DEGs upregulated in infiltrated macrophages. Table S6. DEGs between resident and infiltrated macrophages in at least one of the studied species (human, mouse, and rat) and with one-to-one orthologs across the studied species.  The DEGs are shown with human gene symbols. Table S7. Regulons and the corresponding attributes in renal macrophages in human. Table S8. Regulons and the corresponding attributes in renal macrophages in mouse. Table S9. KEGG enrichment of TFs which belong to regulons with stronger evolutional conservation in infiltrated macrophages. Table S10. KEGG enrichment of TFs which belong to regulons with weaker evolutional conservation in infiltrated macrophages. Table S11. GO enrichment of TFs belonging to regulons which are preferably active in C4C6 branch. Table S12. GO enrichment of TFs belonging to regulons which are preferably active in C0 branch. Table S13. Cellular crosstalk between resident and infiltrated macrophages in human. Table S14. Cellular crosstalk between resident and infiltrated macrophages in mouse. Table S15. Common regulon pairs in human and mouse where regulons show comparatively high correlation with each other (|r| > 0.3)