Additional file 2 of In-organoid single-cell CRISPR screening reveals determinants of hepatocyte differentiation and maturation

Additional file 2: Table S1. Downstream analysis of RNA-seq data for organoids at different culturing conditions (EM, DM_7 and DM_12). Related to Fig. S1c, d. Table S2. sgRNA sequences and their targeting genes used in the pilot screen. Table S3. sgRNA sequences and their targeting genes used in the OSCAR screen. Table S4. Detailed data of regulons computed by SCENIC. Table S5. Enriched GO-BP terms of top 20 variable regulon (Terms > 0). Related to Fig. S4. Table S6. Downstream analysis of RNA-seq data for organoids at different culturing conditions (Fos KO vs WT). Related to Fig. 4c-f. Table S7. Downstream analysis of RNA-seq data for organoids at different culturing conditions (Ubr5 KO vs WT). Related to  Fig. S9. Table S8. Downstream analysis of RNA-seq data for hepatocytes from Ubr5 conditional knockout mice and the wildtype mice (Ubr5 KO vs WT) . Related to Fig. 5f-i. Table S9. The information of primers used in this study. Table S10. The source data and detailed statistics associated with Figs. 4 and 5, Fig. S1, Fig. S9 and Fig. S11.