Data accompanying MetaChrom and "Annotating functional effects of non-coding variants in neuropsychiatric cell types by Deep Transfer Learning"

This is the data accompanying the paper " Annotating functional effects of non-coding variants in neuropsychiatric cell types by Deep Transfer Learning" and the GitHub repository https://github.com/bl-2633/MetaChrom. <strong>/data/bed_files/ </strong>contains the unprocessed bed file used in analysis <strong>/data/seq_data/</strong> contains processed data from the bed files with corresponding partition and labels for each sequence segment. <strong>/trained_model/MetaChrom_model/</strong> contains the pre-trained MetaChrom model on neural developmental context <strong>/trained_models/MetaFeat_model/ </strong>contains the MetaFeat model used in training <strong>/tool/</strong> contains files and software necessary for the processing pipeline.