Additional file 2 of A glimpse of the paleome in endolithic microbial communities

Additional file 2: Supplementary tables: Table S1. Statistics sequence data processing. pwd = powdered sample, pc = rock pieces sample, QC = quality control. Table S2. Identified contaminants for different taxonomic ranks. Freq = frequency, prev = prevalence, p.freq = tail probability at value R, p.prev = tail probability of the chi-square distribution for the respective taxon based on presence/absence in true samples and negative controls, p = p-value from Fisher's exact test, NA = not available. Please see [112] for details regarding the mentioned metrics. Table S3. Phylum-level taxonomic profiles. lib_blk = library blank, ex_blank = extraction blank, pc = rock pieces sample, pwd = powdered sample. Table S4. Basic assembly statistics and results from read recruitment. Table S5. Phylum-level taxonomic profiles of assembled contigs (> 1 kbp). Table S6. Taxonomy and quality information regarding recovered genome bins based on checkm [64] output. Table S7. Functional profile based on KEGG Lvl3 Orthologies. Abundances are given as CoPM. CoPM = copies per million. Table S8. Functional profile based on a subset of KEGG pathways. CoPM = copies per million, logCoPM = log copies per million.