Treefiles for the Figure 4.9 (Chapter 4)
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https://figshare.com/articles/dataset/Treefiles_for_the_Figure_4_9_Chapter_4_/20097170
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Treefiles for the Figure 4.9 (Chapter 2).
Maximum likelihood phylogenetic tree of Rhizobiales.
The tree includes published genomes of Rhizobiales and Rhizobiales MAGs derived from lichen metagenomes (indicated in red). We generated the alignment of 120 marker genes using GTDB-Tk, and calculated the tree using IQ-TREE.
Include two files:
1. rhizobiales.contree: treefile in Newick format
2. rhizobiales_annotated_tree.svg: annotated tree showing the taxonomic assignments of the genomes and presence/absence of genes related to nitrogen fixing and C1 metabolism
创建时间：
2022-06-18
