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Multi-omics with dynamic network biomarker algorithm prefigures organ-specific metastasis of lung adenocarcinoma

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NIAID Data Ecosystem2026-05-02 收录
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https://zenodo.org/record/13764758
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Efficacious strategies for early detection of lung cancer metastasis are of significance for improving the survival of lung cancer patients. Utilizing two clinical cohorts of four major types of lung cancer distant metastases, with single-cell RNA sequencing (scRNA-seq) of primary lesions and liquid chromatography mass spectrometry data of sera, we identified the marker genes and serum secretome foreshadowing the lung cancer site-specific metastasis through dynamic network biomarker (DNB) algorithm. Also, we located the intermediate status of cancer cells, along with its gene signatures, in each metastatic state trajectory that cancer cells at this stage still had no specific organotropism. Furthermore, an integrated neural network model based on the filtered scRNA-seq data was successfully constructed and validated to predict the metastatic state trajectory of cancer cells. Overall, our study provided a new insight to locate the pre-metastasis status of lung cancer and primarily examined its clinical application value, contributing to the early detection of lung cancer metastasis in a more feasible and efficacious way.
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2024-09-15
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