TCR repertoires in human CD4+ T cell subsets: Effector/memory subsets, TCR alpha & TCR beta chain sequencing
收藏DataCite Commons2020-08-26 更新2024-07-28 收录
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https://figshare.com/articles/TCR_repertoires_in_human_CD4_T_cell_subsets_Effector_memory_subsets_TCR_alpha_TCR_beta_chain_sequencing/11604576/1
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资源简介：
TCR repertoire datasets for sorted helper T cell subsets. <br>Includes metadata and preprocessed clonesets for eight sorted effector/memory T cell subsets: Tfh, Th1, Th17, Th1-17, Th22, Th2, Th2a, Treg. CD4+ T cell subsets were sorted from 5 healthy donors PBMC samples. Each sample is presented in two txt files: TCR alpha cloneset file and a separate TCR beta cloneset file. <br>Raw sequencing fastq data was processed with using MIGEC v.1.2.9 (Quality: threshold 3 different UMI sequences for each CDR3-containing clonotype), aligned with MiXCR v.2.1.1. In-frame TCR CDR3 repertoires were extracted with VDJtools v. 1.2.1. Cloneset tables are in VDJtools software format: tab-delimited text files.<br>
提供机构：
figshare
创建时间：
2020-02-03
