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Transcriptome profiling by RNA-seq of the Pseudomonas aeruginosa strain PA14 deleted for the small RNA GssA compared with PA14 wild-type

ChEBI2022-11-30 更新2026-07-12 收录

细菌转录组学

非编码RNA功能

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-MTAB-12073 数据链接链接失效反馈

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资源简介：

Transcriptome profiling by RNA-seq of the Pseudomonas aeruginosa strain PA14 deleted for the small RNA GssA compared with PA14 wild-type

应用场景：

创建时间：

2022-11-30

细菌转录组学

基因表达分析

Total RNA for deep sequencing was isolated by using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's protocol, with some modifications. Each sample added 300 ul TRIzol (I

NIAID Data Ecosystem30

Sinorhizobium fredii HH103 transcriptomic analysis in the presence high concentrations of mannitol

细菌转录组学

非离子胁迫基因表达

In this work we have studied how non-ionic stress caused by the presence of high concentrations of mannitol affects S. fredii HH103 gene expression.

NIAID Data Ecosystem20

Number of enriched GO terms for the target genes of DE miRNAs.

基因功能富集分析

非编码RNA功能

The first two columns show the unique number of enriched GO terms for each experiment, followed by the number of common GO terms. dpi: days post inoculation.

NIAID Data Ecosystem00

Global transcriptional response of Methylorubrum extorquens to formaldehyde stress includes both overlapping and unique gene sets in comparison to antibiotic translational inhibition and expands the role of EfgA. Global transcriptional response of Methylorubrum extorquens to formaldehyde stress includes both overlapping and unique gene sets in comparison to antibiotic translational inhibition and expands the role of EfgA

细菌转录组学

甲醛应激响应

The potency and indiscriminate nature of formaldehyde reactivity upon biological molecules make it a universal stressor. However, some organisms such as Methylorubrum extorquens possess means to rapid

NIAID Data Ecosystem30

Arsenite stress response in Thioalkalivibrio thiocyanoxidans ARh2 and Tv. jannaschii ALM2. Arsenite stress response in Thioalkalivibrio thiocyanoxidans ARh2 and Tv. jannaschii ALM2

嗜盐碱细菌砷胁迫响应

细菌转录组学

Transcriptional response to growth with arsenite by the haloalkaliphilic sulfur-oxidizer Thioalkalivibrio thiocyanoxidans ARh2 and Tv. jannaschii by performing RNA-seq analysis Overall design: Transcr

NIAID Data Ecosystem10

Transcriptome profiling by RNA-seq of the Pseudomonas aeruginosa strain PA14 deleted for the small RNA GssA compared with PA14 wild-type

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