Putative SNPs discovered in genome of Cotesia vestalis
收藏DataONE2015-05-20 更新2024-06-27 收录
下载链接：
https://search.dataone.org/view/null
下载链接
链接失效反馈官方服务：
资源简介：
Individual paired-end reads were aligned against the artificial Cotesia vestalis reference genome obtained from the de novo genome assembly using BWA. The resulting BAM file was then used for the identification of putative SNPs using SAMTOOLS and varFilter from the samtools.pl utility. We only considered nucleotide substitutions and ignored small indels. SNPs were filtered that had a mapping quality higher than 20, a minimum read depth of 3 and a maximum read depth of 90 (3x the average read depth, a strategy to avoid orthologous SNPs, e.g. in multi copy genes.
创建时间：
2015-05-20
