Multiple sequence alignment of 1,870,492 SARS-CoV-2 genomes assembled by the Viridian project
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https://zenodo.org/record/14698858
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资源简介：
The assembled genomes were obtained from the publication by Hunt et al (10.1101/2024.04.29.591666). They were filtered to remove sequences with at least 100 non-ACGT nucleotides or with at least two consecutive Ns (except at the ends). The unaligned filtered sequences are available at https://zenodo.org/records/14698684.
The 1,870,492 remaining sequences were then aligned using Halign3 (10.1093/molbev/msac166), taking 1.2TB of RAM.
The computation was performed on the IFB Core cluster managed by the Institut Français de Bioinformatique.
创建时间：
2025-01-20
