Single nucleotide resolution maps of Illumina mRNA-seq reads representing viral transcripts from BBTV-infected Cavendish banana plants with or without DRC alphasatellite.

For each of the two conditions, i.e. without (BBTV) and with (BBTVa) alphasatellite, Illumina 75 nt forward and reverse reads of the three biological replicates (leaf tissues of three plants) were combined and mapped simultaneously onto the reference sequences of six BBTV components (C, M, N, R, S, U3) and DRC-2016 alphasatellite (alpha). BAM files with mapped viral reads were analyzed by MISIS-2 [80] yielding the count tables of forward and reverse reads, starting or ending at respective positions of the reference sequences. (XLSX)