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TBI RNAseq data tables

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Figshare2025-01-29 更新2026-04-08 收录
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https://figshare.com/articles/dataset/TBI_RNAseq_data_tables/28303880/1
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A description of each tab of the file is below-<b>Stats</b>- Each sample and the aggregated data from all other tabs. At the bottom are statistical values for each comparison.<b>Gencode45</b>- The transcripts per million matrix from Salmon alignment for each sample and every transcript.<b>Sig Transcripts</b>- The list of all transcripts that had statistical significance in each of the four comparisons (A-D). <b>STRING-based</b>- STRING-based gene ontology enrichment terms for the sig transcripts in the four comparisons.<b>CIBERSORTx</b>- Normalized abundance values for each cell type deconvolution of each sample.<b>KRAKEN2_level</b>- The number of reads in each sample that align uniquely to each species annotation. In brackets on the number of paired-end reads that align, such that a 1 only one end of alignment returned reads and a 2 both ends had alignments to the species.<b>MIXCR</b>- The unique amino acid sequences of each chain and the times the sequence is detected in each sample.<b>Heatmap</b>- The raw values used to generate the heatmap within the paper.
提供机构:
Prokop, Jeremy
创建时间:
2025-01-29
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