Pathway analysis results for the lung cancer GWAS data.

1Number of genes in the pathway.2Number of SNPs used in the step 3 in the TRF-pathway algorithm.3P-values for the TRF-Pathway.4P-values for the RF-Pathway.5P-values for PLINK set-based tests.

Figshare2015-12-02 更新00

Enriched pathway analysis on GSE40059 breast cancer data.

Breast-cancer-related pathways are selected by the literature search. A circle in a cell means that the pathway is enriched by the gene set predicted by each method (A: Context-MMIA, B: MMIA, C: GenMi

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PoDA results for sucessive unions of significant pathways in the CGEMS breast cancer data.

Pathway-length based resampled values, denoted , are given along with the odds ratios and associated FDRs for a logistic regression model.

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Pathway analysis results for the breast cancer GWAS data.