PeptiSite
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下载链接:
http://peptisite.ucsd.edu
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资源简介:
It is a comprehensive and reliable database of biologically and structurally characterized peptide-binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. In PeptiSite each site is represented by an ensemble of its complexes with protein, peptide and small molecule partners. The unique features of PeptiSite include (1) the ensemble site representation that provides a new, fourth dimension to the otherwise three-dimensional data, (2) comprehensive characterization of the binding site architecture that may consist of a multimeric protein assembly with cofactors and metal ions (3) analysis of consensus interaction motifs within the ensembles and identification of conserved determinants of these interactions.
提供机构:
UCSD Skaggs School of Pharmacy and Pharmaceutical Sciences
创建时间:
2018-01-28



