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Angus Sequence Data: Animal 45052

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agdatacommons.nal.usda.gov2024-10-21 更新2025-03-22 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Angus_Sequence_Data_Animal_45052/24665979/1
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Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.The National Animal Germplasm Program has germplasm for this animal, with the repository number 45052.There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.Resources in this dataset:Resource Title: Animal 45052 Sequence Data - SCINet.File Name: Web Page, url: https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32145/tar file containing 14 files. The files are: RAPiD-Genomics_F112_CSU_136201_P001_WC05_i5-515_i7-125_S29_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC05_i5-515_i7-125_S29_L003_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC05-i5-515-i7-125_S165_L002_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC05-i5-515-i7-125_S165_L002_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC05-i5-515-i7-125_S29_L001_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC05-i5-515-i7-125_S29_L001_R2_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC05-i5-515-i7-125_S29_L003_R1_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC05-i5-515-i7-125_S29_L003_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC05_i5-515_i7-125_S29_L001_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC05_i5-515_i7-125_S29_L001_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC05_i5-515_i7-125_S29_L002_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC05_i5-515_i7-125_S29_L002_R2_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC05_i5-515_i7-125_S384_L002_R1_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC05_i5-515_i7-125_S384_L002_R2_001.fastq.gzSCINet users: The .tar file can be accessed/retrieved with valid SCINet account at this location: /LTS/ADCdatastorage/NAL/published/node32145/45052.tarSee the SCINet File Transfer guide for more information on moving large files: https://scinet.usda.gov/guides/data/datatransferGlobus users: The files can also be accessed through Globus by following this data link. The user will need to log in to Globus in order to retrieve this data. User accounts are free of charge with several options for signing on. Instructions for creating an account are on the login page.

牛科动物 Bos taurus(牛肉安格斯品种)的全基因组序列数据。数据以“fastq”格式存储。国家动物种质资源计划拥有该动物的种质资源,库编号为45052。每个文件包含两个版本,因采用双端测序技术所致。每个数据线对应两个读取序列(正向读取和反向读取),总计420个读取序列。相关示意图可在集合数据集中找到。在该图中,两个读取序列分别对应读取1和读取3。本数据集包含的资源: 资源标题:动物45052序列数据 - SCINet。 文件名:网页,URL:https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32145/tar文件,包含14个文件,具体文件如下: RAPiD-Genomics_F112_CSU_136201_P001_WC05_i5-515_i7-125_S29_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC05_i5-515_i7-125_S29_L003_R2_001.fastq.gz ... SCINet用户:可通过有效的SCINet账户访问/检索.tar文件,位置为/LTS/ADCdatastorage/NAL/published/node32145/45052.tar。更多关于移动大文件的信息,请参阅SCINet文件传输指南:https://scinet.usda.gov/guides/data/datatransfer。 Globus用户:用户亦可通过Globus访问这些文件,需遵循此数据链接,并在Globus中登录以检索数据。用户账户免费,提供多种登录选项。创建账户的说明位于登录页面。
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