Additional file 9 of Single cell and spatial analysis of immune-hot and immune-cold tumours identifies fibroblast subtypes associated with distinct immunological niches and positive immunotherapy response
The data_raw.csv file is used in the R code to prepare the data and obtain the descriptive statistics. The data_Thesis_Jasp.csv file is the prepared and cleaned data for the analyses in Jasp.
We first identified candidate VMRs, defined as regions of CpG-sites showing the highest variability across all methylation sites.To examine the factors that best explain the variance in methylation in
Density-Flow.dat and Density-Velocity.dat are the raw data in Fig. 3 Syn-flow.dat and Syn-density.dat are the raw data in Fig. 4 Meandist.dat, Steplength.dat and Safedist are the raw data in Fig. 5 Sy
