Data-specific substitution models improve protein-based phylogenetics - data
收藏NIAID Data Ecosystem2026-03-14 收录
下载链接：
https://zenodo.org/record/7628407
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资源简介：
Amino-acid sequence data sets, estimated data-specific amino-acid substitution models, and optimal ML trees.
Data are divided in five folders, each one with a readme.txt file describing it.
├── 1_simulated_data_sets
│ ├── 1500-site_alignments
│ ├── 400-site_alignments
│ └── 8000-site_alignments
├── 2_simulated_data_specific_models
│ ├── Codeml_models
│ ├── FastMG_models
│ ├── IQTREE_models
│ ├── P4_BI_models
│ └── P4_ML_models
├── 3_optimal_ML_trees_simulated_data
│ ├── commonly-used_empirical_models
│ │ ├── cpREV_model_analyses
│ │ └── WAG_model_analyses
│ ├── data_specfic_model_analyses
│ │ ├── Codeml-estimated_model_analyses
│ │ ├── FastMG-estimated_model_analyses
│ │ ├── IQTREE-estimated_model_analyses
│ │ ├── P4BI-estimated_model_analyses
│ │ └── P4ML-estimated_model_analyses
│ └── simulation_model_analyses
├── 4_data_specific_models_empirical_data
│ └── Toussaint18_data_specific_models_27partitions
└── 5_optimal_ML_trees_empirical_data
创建时间：
2023-02-16
