Additional file 3 of Identification and characterization of differentially expressed genes in Caenorhabditis elegans in response to pathogenic and nonpathogenic Stenotrophomonas maltophilia

Additional file 3. CPSR and VSR genes ordered based on gene network rank. WormNet v2 was queried with the 145 CPSR genes or 225 VSR genes. Connected genes are ordered based on WormNet score, which is based on the number of connections that gene has and the strength of the evidence for those connections (Score). C = number of connected CPSR genes to the listed gene. Up/down-regulated = direction of differential expression in response to pathogenic compared to nonpathogenic strains. Asterisk indicates different direction of regulation depending on the comparison considered.