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Ribo-seq of decitabine-treated WT HL-60 cells

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https://www.ncbi.nlm.nih.gov/sra/SRP417361
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资源简介:
Ribolog was used to compare translational efficiency across conditions (https://github.com/goodarzilab/Ribolog). Briefly, Ribolog applies a logistic regression to model individual Ribo-seq and RNA-seq reads in order to provide estimates of logTER (i.e., logFC in TE) and its associated p-value across the coding transcriptome. Overall design: Ribosome profiling was performed as previously described (PMID: 28579404) on HL-60 cells treated with DMSO or decitabine.
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2023-01-20
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