Additional file 5 of Application of a French cattle pangenome, from structural variant discovery to association studies on key phenotypes

Supplementary Material 5 Table S3 Frequencies of SVs identified in the pangenome and in the local database. Description: Estimation of allelic frequencies, Allele with the Minor Allele Frequency (al_maf), Minor Allele Frequency (freq_maf), Heterozygosity (He) estimated by He = 2pq and Polymorphic Information Content (PIC) estimated by PIC = He-2p2q2.