Additional file 9: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

Table S6. Short, cysteine-rich, secreted proteins differentially expressed in infected leaf tissue versus mycelium grown in medium. SignalP 4.1 was used to predict proteins that are secreted from the cell. Proteins predicted to be short (<300 amino acid residues for the mature sequence), cysteine-rich (>4 cysteines), secreted, and for which the corresponding transcript is differentially expressed are shown in the table. For each protein sequence, the table indicates JGI protein and gene IDs, the location of the gene within the genome (including scaffold number, start and stop positions), the log2 fold change, the adjusted p-value for differential expression of the corresponding transcript, the length of the mature protein in amino acid residues, the number of cysteines in the mature sequence, and blastp results from a search against the NCBI non-redundant protein sequence database. Blastp results include the species where the closest homolog for the sequence was found, the description of the homolog, its NCBI accession number, the bitscore, the E-value, percent identity and similarity, notes on other species where homologs were found, and any conserved domains identified using the Conserved Domain Database. Protein sequences for which the corresponding transcripts have higher expression in infected leaf tissue are colored green, and those with higher expression in medium are colored blue. (XLS 64Â kb)