CCavallo_Thesis Appendix_NGS Bioinformatics pipeline 18s.Rmd
收藏Research Data Australia2026-05-29 收录
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资源简介：
Bioinformatic workflow.This code will allow the user to clean and organise their DNA sample library and then calculate measures of taxon abundance for analysis. Important steps include: * Removing + samples with less than 100 target reads + Non-target sequences + Specific samples (e.g. those that did not meet thresholds for inclusion, like CT) * Producing group totals for higher taxonomic levels * Calculating the frequency of occurrence (FOO) and relative read abundance (RRA) of items in the dataset
提供机构：
Monash University
