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BrentLab/callingcards

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Hugging Face2026-04-22 更新2026-04-12 收录
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资源简介:
这是一个关于酵母转录因子结合数据的生物信息学数据集,名为Calling Cards Transcription Factor Binding Dataset。数据集包含多个配置,如注释特征、基因组映射及其元数据等。数据集中记录了转录因子与目标基因的结合情况,包括实验和背景中的转座子插入事件(hops)、富集分数、统计显著性等。实验条件包括室温下的合成培养基,碳源为2%的D-半乳糖,氮源为未指定浓度的氨基酸缺失混合物。数据集还提供了详细的元数据,如调控因子信息、数据质量指标和实验批次等。该数据集由Brent Lab和Mitra Lab在华盛顿大学生产,用于研究转录因子结合的功能协同作用。

This is a bioinformatics dataset on yeast transcription factor binding data, named Calling Cards Transcription Factor Binding Dataset. The dataset includes multiple configurations such as annotated features, genome maps, and their metadata. It records the binding of transcription factors to target genes, including transposon insertion events (hops) in experimental and background samples, enrichment scores, and statistical significance. Experimental conditions include synthetic media at room temperature, with a carbon source of 2% D-galactose and a nitrogen source of unspecified concentration amino acid dropout mix. The dataset also provides detailed metadata, such as regulator information, data quality indicators, and experimental batches. This dataset was produced by the Brent Lab and Mitra Lab at Washington University for studying the functional synergy of transcription factor binding.
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