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Genome alignments of reference species<br>
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创建时间：
2020-09-29
相关数据集
BAM files and outputs from NAGATA, StringTie2, Bambu, and Isoquant, Figure 4, NAGATA
BAM files and associated inputs used to generate data shown in Figure 4 of NAGATA manuscript. Outputs from NAGATA, StringTie2, Isoquant, and Bambu are also included
DataCite Commons2024-05-24 更新90
Off-target analysis of ZFN gene edited Dkk3b CFP mouse (Founder #19).
Mouse C57bl6 genome GRCm38; mismatched bases are italicized and underlined.
NIAID Data Ecosystem60
multi_species_genomes
Multi-species genome 仓库的核心定位是为 Nucleotide Transformer 模型提供预训练语料。它包含从 NCBI 收集并经过筛选的 850 种物种的基因组数据，总计 1740 亿个核苷酸，约 290 亿个 tokens。数据集中包括细菌、真菌、无脊椎动物、原生动物以及哺乳动物和其他脊椎动物。每个数据实例包含序列字符串、序列描述、起始和结束核苷酸索引以及基因组的 f
OpenCSG2024-07-19 更新60
japonica reference indica query genome alignment result in BED format
BED format genome alignment results where japonica nipponbare was used as reference and indica 93-11 was used as query genome. Indica chromosome was named as SAI.chromosome_number and japonica chromos
Mendeley Data2024-01-31 更新70
Assemblies compared in a pair-wise fashion using Mummer, and the proportions covered from each of the assemblies are shown below.
The upper triangular values for each accession represent the proportion of sequences at the left that were present in the sequences at the top of the triangle. The lower triangular values represent th
NIAID Data Ecosystem60
