MOESM5 of Global impact of somatic structural variation on the DNA methylome of human cancers

Name: MOESM5 of Global impact of somatic structural variation on the DNA methylome of human cancers
Creator: Lee, Eunjung; Tang, Jiabin; Sun, Huandong; Bristow, Christopher; Mahadeshwar, Harshad; Park, Peter; Yang, Lixing; Kucherlapati, Melanie; Zhang, Jianhua; Pantazi, Angeliki; Chin, Lynda; Protopopov, Alexei; Luquette, Lovelace; Ren, Xiaojia; Lee, Semin; Xi, Ruibin; Seidman, Jonathan; Zhang, Yiqun; Creighton, Chad; Seth, Sahil; Kucherlapati, Raju; Hadjipanayis, Angela; Song, Xingzhi
Published: 2024-02-06 00:00:00
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Figshare2024-02-06 更新2026-04-08 收录

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Additional file 5. Related to Fig. 2. By distance metric method: complete set of gene-level correlations between expression and nearby SSV event, according to regression model applied (i.e. what covariates were considered). The top significant mRNAs (FDRâ <â 10%, correcting for cancer type and CNA) and related information are highlighted in a separate Excel tab. Results for microRNAs are provided in a separate Excel tab. Also includes Gene Ontology (GO) terms associated with genes positively correlated (FDRâ <â 5%, with corrections for cancer type and CNA) with occurrence of SSV in proximity to the gene.

提供机构：

Lee, Eunjung; Tang, Jiabin; Sun, Huandong; Bristow, Christopher; Mahadeshwar, Harshad; Park, Peter; Yang, Lixing; Kucherlapati, Melanie; Zhang, Jianhua; Pantazi, Angeliki; Chin, Lynda; Protopopov, Alexei; Luquette, Lovelace; Ren, Xiaojia; Lee, Semin; Xi, Ruibin; Seidman, Jonathan; Zhang, Yiqun; Creighton, Chad; Seth, Sahil; Kucherlapati, Raju; Hadjipanayis, Angela; Song, Xingzhi

创建时间：

2019-10-15