UCE datasets for "Old specimens for old branches: Assessing effects of sample age in resolving a rapid Neotropical radiation of squirrels"

<strong>Datasets description:</strong> <strong>Dataset 1</strong>. Alignment of 3,841 UCE loci (1,688,462 base-pairs), generated considering 40% of sample representativeness per locus and without filtering for information content. <strong>Dataset 2</strong>. Alignment of 3,545 UCE loci (1,572,845 base-pairs), generated considering 50% of sample representativeness per locus and without filtering for information content. <strong>Dataset 3</strong>. Alignment of 2,069 UCE loci (937,316 base-pairs), generated considering 60% of sample representativeness per locus and without filtering for information content. <strong>Dataset 4</strong>. Alignment of 2,112 UCE loci (927,942 base-pairs), generated considering 40% of sample representativeness and a minimum of 5% of informative sites per locus. <strong>Dataset 5</strong>. Alignment of 1,742 UCE loci (763,974 base-pairs), generated considering 50% of sample representativeness and a minimum of 5% of informative sites per locus. <strong>Dataset 6</strong>. Alignment of 977 UCE loci (438,765 base-pairs), generated considering 60% of sample representativeness and a minimum of 5% of informative sites per locus.