Predicting and modeling protein-protein interactions in E. coli envelopome
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https://zenodo.org/record/6846914
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资源简介：
Structural models and Supplementary data described in the reference:
Deep learning-driven insights into super protein complexes for outer membrane protein biogenesis in bacteria.
Mu Gao, Davi Nakajima An, and Jeffrey Skolnick. eLife, 2022. 11: p. e82885.
List of files:
af2c_fea_220331.tar -- A tarball of input features of full E coli proteome to AF2Complex version 1.3.0. Feature files are pickled and gzipped, which AF2Complex v1.3 takes as input directly.
Results of an application to E coli envelopome on four query proteins from the outer membrane biogenesis pathway.
Supplementary Data.xlsx -- Virtual PPI screening results of PpiD, YfgM, SurA, and BamA.
screening_top1_models.zip -- Compressed top 1 dimeric models of top hits from the PPI screening. Note that these models are unrelaxed.
predicted structural models.zip -- Compressed structural models of supercomplexes formed in the OMP biogenesis pathway described in the reference.
创建时间：
2022-12-30
