Cell-state specific eQTLs.

For each row we list a SNP and the gene transcript for which it is a cis-eQTL. We indicate whether the effect is observed in resting or stimulated CD4+ effector memory T cells. For each SNP we indicate the fold change in expression conferred per allele, assuming an additive model and the false discovery rate estimate. Finally, we indicate whether the effect is specific for CD4+ effector memory T cells; we define specificity as the absence of any cis-eQTL effect in PBMCs at FDR>50% [8].* pΔ measures the difference between the effect sizes across resting and stimulated states.