Melophagus metatranscriptome

Supplementary files:<br>Supplementary_file_1_AM_expression.xls<br>Supplementary_file_2_MO_expression.xls<br>Additional files:(1) Trinity.fasta &amp; Trinity.fasta.transdecoder.pepMeta-transcriptome assembly for M. ovinus, including predicted proteins.<br>(2) Trinity_expressed_decontaminated.fasta &amp; Trinity_expressed_decontaminated.fasta.transdecoder.pepFiltered reference transcriptome assembly (including proteome) for M. ovinus. Bacterial, kinetoplastid, and chordate transcripts were removed and only transcripts with digital expression &gt; 1 were retained.<br>(3) trinotate_annotation_report.xlsAnnotation report for all the transcripts.<br>(4) TrinotateWeb.sqliteTrinotateWeb.sqlite database with complete data for M. ovinus analyses.<br>(5) Supplementary figures with quality check analyses for individual samples/replicates and non-interactive differential expression visualization (Volcano and MA plots).<br>(6) AME_300418.gbkArsenophonus melophagi genbank file with updated pseudogene calls.<br>(7) AME_pathways.pdfCellular overview of A. melophagi with enzymatic steps filled by heatmap colors according to their FPKM expression (log scale).