Pseudomonas putida KT2440 Raw sequence reads

NIAID Data Ecosystem2026-04-25 收录

细菌基因调控

c-di-GMP信号转导

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP193916 数据链接链接失效反馈

官方服务：

资源简介：

To compare gene expression in high c-di-GMP strain and normal c-di-GMP level strain, and find out the role of fleQ in gene regulation.

创建时间：

2020-05-20

CRISPR-Cas13b NGS data. Bacteria

CRISPRi基因编辑

细菌基因调控

For the paper "Cas13b is a Type VI-B CRISPR-associated RNA-Guided RNAse differentially regulated by accessory proteins Csx27 and Csx28." Contains native and heterologous RNA-Sequencing of B. zoohelcum

NIAID Data Ecosystem40

Differential expression (log 2 FC) of selected biofilm, virulence, and regulatory genes derived from RNA-Seq comparisons of serotype O157:H7 strain PA20 grown for five hours or 12 hours in LB-NS in the presence of different SMX-TM concentrations as listed.

细菌基因调控

抗生素响应

Comparisons with a log2 FC ≥1.5 or ≤-1.5 (fold change ≥3) are shown in bold.

NIAID Data Ecosystem20

Genes whose expression is significantly modulated by RcsB.

转录因子靶基因鉴定

细菌基因调控

aGenes are grouped by putative or known operons (ordered in the direction of transcription). Genes whose expression was found to be significantly modulated are in bold (see Materials and Methods). Gen

Figshare2015-12-02 更新10

High-confidence CRP binding sites on the ETEC H10407 chromosome identified by ChIP-seq.

转录因子结合位点

细菌基因调控

aChomosome coordinate of the ChIP-seq peak in H10407. Underlined text indicates that the ChIP-seq peak maps to sequence that is not conserved in E. coli K-12. bCRP binding site sequence predicted by M

NIAID Data Ecosystem30

MelR experiment 1. Escherichia coli

基因表达谱分析

细菌基因调控

Three independent repeats of the same experiment, comparing gene expression in E. coli cultures expressing either no MelR, or a constitutively active MelR* protein. Keywords: repeat sample

NIAID Data Ecosystem10

Pseudomonas putida KT2440 Raw sequence reads

资源简介：

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