bigbio/lll

---
language:
- en
bigbio_language:
- English
license: unknown
multilinguality: monolingual
bigbio_license_shortname: UNKNOWN
pretty_name: LLL05
homepage: http://genome.jouy.inra.fr/texte/LLLchallenge
bigbio_pubmed: True
bigbio_public: True
bigbio_tasks:
- RELATION_EXTRACTION
---

# Dataset Card for LLL05

## Dataset Description

- **Homepage:** http://genome.jouy.inra.fr/texte/LLLchallenge
- **Pubmed:** True
- **Public:** True
- **Tasks:** RE

The LLL05 challenge task is to learn rules to extract protein/gene interactions from biology abstracts from the Medline
bibliography database. The goal of the challenge is to test the ability of the participating IE systems to identify the
interactions and the gene/proteins that interact. The participants will test their IE patterns on a test set with the
aim of extracting the correct agent and target.The challenge focuses on information extraction of gene interactions in
Bacillus subtilis. Extracting gene interaction is the most popular event IE task in biology. Bacillus subtilis (Bs) is
a model bacterium and many papers have been published on direct gene interactions involved in sporulation. The gene
interactions are generally mentioned in the abstract and the full text of the paper is not needed. Extracting gene
interaction means, extracting the agent (proteins) and the target (genes) of all couples of genic interactions from
sentences.

## Citation Information

```
@article{article,
author = {Nédellec, C.},
year = {2005},
month = {01},
pages = {},
title = {Learning Language in Logic - Genic Interaction Extraction Challenge},
journal = {Proceedings of the Learning Language in Logic 2005 Workshop at the International Conference on Machine Learning}
}

```

原始信息汇总

数据集卡片 LLL05

数据集描述

• 主页: http://genome.jouy.inra.fr/texte/LLLchallenge
• PubMed: 是
• 公开: 是
• 任务: 关系抽取 (RE)

LLL05 挑战任务是从 Medline 文献数据库的生物学摘要中学习规则，以提取蛋白质/基因相互作用。挑战的目标是测试参与的 IE 系统识别相互作用和相互作用的基因/蛋白质的能力。参与者将在测试集上测试他们的 IE 模式，目的是提取正确的代理和目标。挑战重点是 Bacillus subtilis 中的基因相互作用信息抽取。提取基因相互作用是生物学中最流行的 IE 任务。Bacillus subtilis (Bs) 是一种模型细菌，关于直接参与孢子形成的基因相互作用已发表了许多论文。基因相互作用通常在摘要中提及，不需要全文。提取基因相互作用意味着从句子中提取所有基因相互作用的代理（蛋白质）和目标（基因）。

引用信息

@article{article, author = {Nédellec, C.}, year = {2005}, month = {01}, pages = {}, title = {Learning Language in Logic - Genic Interaction Extraction Challenge}, journal = {Proceedings of the Learning Language in Logic 2005 Workshop at the International Conference on Machine Learning} }