Figure 5.
收藏DataCite Commons2022-09-06 更新2024-07-29 收录
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<strong>Figure 5. Summary of whole genome sequencing on ferret inoculum and nasal wash samples from pure WT, pure NA-H275Y+PA-I38T and 50% WT: 50%NA-H275Y+PA-I38T isolate infected ferrets. </strong>Ferret inoculum and nasal wash samples post inoculation/exposure (PI/E) from pure WT, pure NA-H275Y+PA-I38T or 50% WT: 50%NA-H275Y+PA-I38T virus infected ferrets were sequenced using WGS. Five amino acid (AA) changes (across the HA, NA, PA and PB1 genes) distinguished ferret inoculum WT and NA-H275Y+PA-I38T virus genotypes. The bar charts display the proportion of AA codon changes detected by NGS for each sample associated with the WT (white) and NA-H275Y+PA-I38T (black) virus inoculum for each gene loci (along X-axis; HA-294, NA-275, PA-38, PA-325, PB1-129). Percentage frequency of AA codons is determined from variant bases called with a read depth over 1000 and frequency of greater than 5%.
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figshare
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2022-09-06
