Additional file 1 of Mitochondrial sequence variants: testing imputation accuracy and their association with dairy cattle milk traits

Additional file 1: Table S1. XT-50k mitochondrial genotyping positions, SNP name and lift over position on the mitochondrial reference genome CM008198.1. Table S2. List of mitochondrial HD SNP markers overlapping reference population genotypes. Table S3. Summary statistics of imputation accuracies for mitochondrial sequence variants in the reference and validation population. Table S4. WAS results for milk traits using 9515 cows with real mitochondrial xt-50k genotypes and imputed sequence variants (DR2 > 0.9).