LD reference panel for UKB-PPP cis-pQTL
收藏NIAID Data Ecosystem2026-05-02 收录
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资源简介:
NEWLOC_protein.txt includes information for 2954 cis-pQTL regions. Each row name in the file follows the format: [GeneSymbol].[GeneSymbol]_[UniProtID]_[OlinkID]_v[Version]_[PanelName]_[Number].[Chromosome]:[StartPosition]-[EndPosition]; For example, "A1BG.A1BG_P04217_OID30771_v1_Inflammation_II_2.19:57856549-59864858" In the "LD.path", it includes LD files, eigenvectors, and eigen matrixes for all local regions, end by "_LDSVD.rda" In the "bim.path", it includes bim files for local regions, which helps to clean the summary statistics data and check if there are multiallelic or duplicated SNPs
创建时间:
2024-11-23



