Comparison of L1 insertions in hg19 with six other mammalian genomes

The table contains the position and result of cross-species comparison for all RepeatMasker annotated L1 elements in hg19. File is gzip'ped. The first eleven columns correspond to the information provided by RepeatMasker. Then 4 columns provide annotation of each L1 as used in the associated publication. The remaining columns refer to the result from liftover of the L1 to the respective genome (hg38, gorGor5, rheMac8, mm10, rn6, bosTau8, canFam3), and consists of one of four categories: absent, degenerate, notLINE, or present. Degenerate means the L1 was lifted to the genome, but was heavily truncated (size less than 33% of human). notLINE means the L1 was lifted but the liftover position is not recognised as a LINE repeat by RepeatMasker in the new genome.