WGSeq_RNAseq_ChIPseq_Cancer_ICGC_DATA_SET_xmas_MB_2013_07_10 - samples
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下载链接：
https://www.omicsdi.org/dataset/ega/EGAD00001000664
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资源简介：
Whole Genome Seq: Illumina HiSeq sequence data (with >30x coverage) were aligned to the hg19 human reference genome assembly using BWA (Li and Durbin, 2009);
duplicate reads were removed from the final BAM file. No realignment or recalibration was performed. Paired-end RNA sequencing reads were mapped to the hg19 assembly of the human reference genome using BWA.
Each ChIP-seq library was sequenced with two complete lanes on the Illumina HiSeq 2500 in the 101-bases paired-end rapid mode and aligned to hg19 using bwa.
This resulted in the following coverage values (genome-wide, after deduplication, including all uniquely mapping reads):
GBM103 macroH2A1: 17x H3K36me3: 20x
MB59 macroH2A1: 11x H3K36me3: 11xEGA dataset EGAD00001000664
创建时间：
2017-07-26
