BACDAC supporting processed data for publication
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Processed data for 36 TCGA samples and samples represented in figure 1 and figure 2 of the BACDAC publication: Tumor ploidy determination in low-pass whole genome sequencing and allelic copy number visualization using the Constellation Plot. For each sample 3 types of files are included, 1) segmentation file (.csv), 2) read depth counts binned over 30kb and 100kb windows (.Rds) and 3) ref/alt counts for reference snp positions, one file for each chromosome 1 - 22 and X (.Rds). Total number of files for each sample is 26. For the TCGA samples, files are available for both the high coverage (as available from TCGA) and the low-pass (down-sampled) samples presented in the BACDAC publication.
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Zenodo创建时间:
2025-04-25



