RNALocate

RNALocate is a web-accessible database that aims to provide a high-quality RNA subcellular localization resource and facilitate future researches on RNA function or structure. RNALocate v3.0 is a comprehensive, upgraded repository cataloging the dynamic subcellular localization of diverse RNA types across numerous species and cellular conditions, integrating over 850 sequencing datasets and covering 1.8 million entries. It uniquely provides a machine learning-based prediction tool (using CNNs and Transformers) for localizing seven RNA types across eleven cellular compartments.

搜集汇总

背景与挑战

背景概述

RNALocate v3.0是一个专注于RNA亚细胞定位的数据集，包含超过125万条实验验证数据，覆盖26种RNA类别、242个物种和177种亚细胞定位。它提供搜索、浏览、动态RNA-seq分析和预测工具等功能，支持多种RNA类型的定位预测，并整合了超过850个样本的高通量测序数据进行表达分析，帮助研究RNA在细胞内的分布和动态变化。