Oxfordshire human bloodstream infection isolate sequence data

If you use this data, please cite: Matlock, William, and Lipworth, Samuel et al. "Enterobacterales plasmid sharing amongst human bloodstream infections, livestock, wastewater, and waterway niches in Oxfordshire, UK." Elife 12 (2023): e85302.
This dataset contains sequence data for n=738 human bloodstream Enterobacterales isolates collected from Oxfordshire, UK in 2008-2018:
assemblies.tar.gz: Hybrid assemblies for all isolates, totalling 2618 circularised contigs (chromosomes and plasmids)long_reads.tar.gz: ONT long-reads for all isolatesshort_reads.tar.gz: Illumina paired-end short-reads for all isolates