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Using RNA-Seq to create sample-specific proteomic databases that enable mass spectrometric discovery of splice junction peptides

ChEBI2013-05-17 更新2026-07-21 收录

蛋白质组学数据库

剪接变异肽段发现

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-45428 数据链接链接失效反馈

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Using RNA-Seq to create sample-specific proteomic databases that enable mass spectrometric discovery of splice junction peptides

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创建时间：

2013-05-17

蛋白质组学数据库

质谱数据分析

This FAIRsharing record describes: The Global Proteome Machine Database (gpmDB holds the minimum amount of information necessary for common bioinformatics-related tasks (such as sequence assignment v

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Targeted analysis of data-independent acquisition (DIA) data needs a spectral library, which is generated by data-dependent acquisition (DDA) experiments or directly from DIA data. A comparison of the

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Using RNA-Seq to create sample-specific proteomic databases that enable mass spectrometric discovery of splice junction peptides. Homo sapiens

可变剪接功能验证

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Many new alternative splice forms have been detected at the transcript level using next generation sequencing (NGS) methods, especially RNA-Seq, but it is not known how many of these transcripts are b

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蛋白质翻译后修饰

蛋白质组学数据库

Bottom-up proteomics database search algorithms used for peptide identification cannot comprehensively identify post-translational modifications (PTMs) in a single-pass because of high false discovery

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Using RNA-Seq to create sample-specific proteomic databases that enable mass spectrometric discovery of splice junction peptides

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