Datasets for Cornet, Magain et al. Exploring syntenic conservation across genomes for phylogenetic studies of organisms subjected to horizontal gene transfers: a case study with Cyanobacteria.
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下载链接：
https://figshare.com/articles/dataset/Datasets_for_Cornet_Magain_et_al_Exploring_syntenic_conservation_across_genomes_for_phylogenetic_studies_of_organisms_subjected_to_horizontal_gene_transfers_a_case_study_with_Cyanobacteria_/12093882
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资源简介：
Multiple Sequences Alignments (FASTA file format) for the various trees in the study by Cornet, Magain et al. Exploring syntenic conservation across genomes for phylogenetic studies of organisms subjected to horizontal gene transfers: a case study with Cyanobacteria.
Individual genes (OGs)- 1160 OGs x 16 taxa: prot MSAs (= single-copy OGs)- 378 OGs x 28 taxa: prot and nucl MSAs (= neighbor genes)
- 99 OGs x 16 taxa: prot and nucl MSAs (= 28 CORs)- 90 OGs x 28 taxa: prot and nucl MSAs (= 25 CORs)
Supermatrices (concats)- 1160 OGs x 16 taxa: 100 jackknife (JK) replicates (prot MSAs and trees)- 378 OGs x 28 taxa: prot and nucl MSAs
- 99 OGs x 16 taxa: prot and nucl MSAs- 90 OGs x 28 taxa: prot and nucl MSAs
创建时间：
2020-04-07
