Figure 3. Pseudo-batches

NIAID Data Ecosystem2026-03-12 收录

单细胞数据整合

批次效应校正

数据链接：

https://figshare.com/articles/dataset/Figure_3_Pseudo-batches/16621078 数据链接链接失效反馈

官方服务：

资源简介：

Clusters and pseudo-batches labels to re-create the integrations of Figure 3 from Canek's manuscript.

创建时间：

2021-09-15

Example Data

单细胞数据整合

细胞对齐

Single-cell technologies have transformed our understanding of cellular heterogeneity through multimodal data acquisition. However, robust cell alignment remains a major challenge for data integration

DataCite Commons2025-04-08 更新60

guidance.graphml.gz

单细胞数据整合

基因调控

Graph linking promoter regions to genes used as input of the method scGLUE for the integration of rna and atac data from cell lines

DataCite Commons2023-04-17 更新50

Metabolomics approach to understand the resource partitioning in Chlorella during growth

微藻代谢

批次效应校正

We use untargeted high-resolution mass spectrometry to understand the metabolic differences at exponential and stationary growth stages using 22 Chlorella strains collected from South East Asia. Using

NIAID Data Ecosystem40

Correcting batch effects in case-control microbiome studies.

微生物组

批次效应校正

OTU table, representative sequences, and metadata from combined Baxter, Zeller, and Zackular studies (colorectal cancer case-control datasets). These data were processed using a standardized workflow

DataCite Commons2020-08-30 更新60

Beaconet: A reference-free method for integration of multiple batches of single cell RNA-seq data

单细胞RNA测序

批次效应校正

The analysis code, the visualization of all correction results of benchmark methods, the preprocessed benchmark datasets in the paper "Beaconet: A reference-free method for integration of multiple bat

Figshare2024-08-31 更新50

Figure 3. Pseudo-batches

资源简介：

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