Additional file 7 of Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

Additional file 7: Supplementary Table S7. Differential motif deviation analysis results generated using chromVAR in native samples. Files contain results for differential deviation score tests between clusters for all motifs. Column 1 is the human motif ID from JASPAR CORE database; Column 2 shows the cluster of interest for each differential test; Columns 3 and 4 indicate the p value and adjusted p value calculated by the differentialDeviations function in chromVAR; Column 5 shows the difference between the mean of bias corrected deviations in the cluster of interest and the mean of bias corrected deviations in all other clusters.

附加文件 7：补充表 S7。使用 chromVAR 在原生物样中生成的差异基序偏差分析结果。文件包含所有基序之间的差异偏差分数测试的簇结果。第 1 列为来自 JASPAR 核心数据库的人类基序 ID；第 2 列显示每个差异测试的感兴趣簇；第 3 和第 4 列指示由 chromVAR 中的 differentialDeviations 函数计算出的 p 值和调整后的 p 值；第 5 列显示了感兴趣簇中偏差校正偏差的平均值与其他所有簇中偏差校正偏差的平均值之间的差异。