Additional file 2 of Transcriptomics provides a robust framework for the relationships of the major clades of cladobranch sea slugs (Mollusca, Gastropoda, Heterobranchia), but fails to resolve the position of the enigmatic genus Embletonia

Additional file 2. Table S1: Sampling information for the species collected for this study. Table S2: NCBI accession numbers for all species used in this study. Table S3: Statistics of raw sequence reads before and after trimming. Table S4: Assembly statistics. Table S5: BUSCO results. Table S6: Results of the Quality Checker script and selection of the best assembly. Table S7: Information on sequences removed during contamination filtering. Table S8: Number of removed outlier sequences per species. Table S9: Group definitions to compile the intermediate data set. Table S10: Information content and evolutionary rates of the orthologs included in the strict data set. Table S11: Supermatrix diagnostics of data sets used in this study. Table S12: Results of the Quartet Sampling analysis. Table S13: Group definitions used for Four-cluster Likelihood Mapping (FcLM) analyses. Table S14: FcLM results testing the position of Embletonia. Table S15: AU test results on the intermediate and strict (partitioned, unpartitioned, SOS) data sets.