Supplement 1. An R library "mso" for the spatial partitioning of ordination results from PCA, RDA, CA, and CCA, including a diagnostic plot.

File List
All files at once

mso_1.6-1.tar.gz

Source
code

mso.R

plot.mso.R

Help
files/documentation

mso.RD

index.txt

description.txt

DescriptionAn archive containing the mso library
with functions mso.R and plot.mso.R (source code) as well as a help file mso.Rd,
an index and a description file as required for an R package. The mso library
requires the R base and the mva and vegan libraries, all of which can be downloaded
from http://cran.r-project.org/.

The function mso.R adds an attribute
vario, containing variograms of different variance components, to an object
of class cca, generated by the functions cca or rda of the vegan library. The
function plot.mso.R provides various options for a diagnostic plot and associated
significance tests (see paper). For details, see the help file.