e53bdae9-f9f4-4b8f-a003-669696181894 - samples
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下载链接：
https://www.omicsdi.org/dataset/ega/EGAD00001011111
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资源简介：
No. of samples: 80 (28 ULP-WGS, 26 WES, 26 RNA-SEQ)
File types: FASTQ (28 ULP-WGS, 19 WES, 18 RNA) and BAM (7 WES, 8 RNA)
Technology used: Sequencing - Illumina Novoseq 6000; Map/Align - Illumina DRAGEN v3.7.5; Genome assembly - GrCh38p13
Filename nomenclature:
- SampleName_Passage_SampleType_TissueType_SequencingType
- Passage of: PX = unknown; PZ = from patient; P0 = first passage from patient on plastic; P1 = first passage from plastic/PDX/organoid
- SampleType: STN = normal; STT = tumor
- SampleType STN: 00 = tissue unknown; 01 = adjacent normal; 02 = fibroblast; 03 = germline blood; 21 = cell line from patient tissue; 22 = cell line from PDX; 23 = cell line from patient fibroblast
- SampleType STT: 00 = tissue unknown; 01 = primary tumor; 21 = cell line from patient; 22 = cell line from PDX
- TissueType: WT = Wilm's tumor; 00 = kidney unknown; 01 = kidney left; 02 = kidney right
- SequencingType: 00 = unknown; 02 = ultra-low pass whole-genome sequencing; 20 = whole-exome; 61 = bulk RNA-sequencingEGA dataset EGAD00001011111
创建时间：
2023-07-19
