DeepDoublet identifies neighboring cell dependent gene expression
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://figshare.com/articles/dataset/DeepDoublet_identifies_neighboring_cell_dependent_gene_expression/27217101
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资源简介：
ADoub_new.zip contains ADoub.npy and ADoub_meta.csvADoub.csv has the UMI counts of 8000 genes of 400,000 artificial doublets.
ADoub_meta.csv has the meta information of the 400,000 artificial doublets.
The meta file has four columns:
| Column | Description |
|---------|--------------------------------------------------|
| `s1` | Index of the first single cell |
| `MF_s1` | Proportion of the first single cell (`s1`) |
| `s2` | Index of the second single cell |
| `MF_s2` | Proportion of the second single cell (`s2`) |
How to load the data?ADoub_meta = pd.read_csv('ADoub_meta.csv')
X = np.load('ADoub.csv')
Trained modelsDecomp_hep_LEC_1.h5 is the model to decompose the doublets to hepatocytes.
Decomp_hep_LEC_2.h5 is the model to decompose the doublets to LECs (liver endothelial cells).
创建时间：
2024-10-13
